As part of the GSA from Cycle 2 you compared the sequence of opsin fromchannelrhodopsin and opsin from rhodopsin.Based on your findings, and our discussion in class, what can we conclude?A. The opsin sequences are not identical but the E-value indicates clear homology.B. Seven membrane-spanning domain proteins that bind retinal evolved more than once.C. G-protein-coupled receptors are found in Chlamydomonas and humans.D. Two proteins with very different primary sequences can fold into nearly identicalshapes.
Question
As part of the GSA from Cycle 2 you compared the sequence of opsin fromchannelrhodopsin and opsin from rhodopsin.Based on your findings, and our discussion in class, what can we conclude?A. The opsin sequences are not identical but the E-value indicates clear homology.B. Seven membrane-spanning domain proteins that bind retinal evolved more than once.C. G-protein-coupled receptors are found in Chlamydomonas and humans.D. Two proteins with very different primary sequences can fold into nearly identicalshapes.
Solution
The question seems to be asking for a conclusion based on a comparison of the sequence of opsin from channelrhodopsin and opsin from rhodopsin. However, without the specific findings from the GSA from Cycle 2, it's difficult to provide a definitive answer.
However, based on general knowledge:
A. The opsin sequences are not identical but the E-value indicates clear homology. This could be possible as E-value is a parameter that describes the number of hits one can "expect" to see by chance when searching a database of a particular size. If the E-value is small, the match is significant.
B. Seven membrane-spanning domain proteins that bind retinal evolved more than once. This could be possible as evolution often involves the same or similar solutions to a problem being developed more than once.
C. G-protein-coupled receptors are found in Chlamydomonas and humans. This is true. G-protein-coupled receptors are a large protein family of receptors that sense molecules outside the cell and activate internal signal transduction pathways.
D. Two proteins with very different primary sequences can fold into nearly identical shapes. This is also true. The shape of a protein is determined by its amino acid sequence. Two proteins with different sequences can fold into similar shapes if the sequences have similar physical and chemical properties.
Without the specific findings from the GSA from Cycle 2, it's difficult to provide a definitive answer. However, based on general knowledge, all of the statements could be true.
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