Synthesis of coenzyme A (CoA) requires vitamin B5 as a substrate. In bacteria, vitamin B5 is synthesized by condensation of β-alanine and pantoic acid. β-alanine is produced by decarboxylation of L-aspartate, mediated by the enzyme aspartate α-decarboxylase (ADC). Active ADC is formed when its inactive precursor, PanD, binds to a regulatory complex composed of acetyl coenzyme A (AcCoA) and a protein known as PanZ. Formation of the PanD-PanZ-AcCoA complex causes the activation loop of PanD to fold into a β-pleated sheet, resulting in PanD autocleavage. Researchers hypothesize that this conformational change allows the Thr57 residue to cleave the N-terminal end of PanD to form ADC.The limited information on the role of PanZ in the synthesis of CoA has stimulated an investigation of its effect on ADC activity. Escherichia coli cells were provided with varying concentrations of PanZ, and the rate of β-alanine production was measured in three different conditions (Figure 1). Reaction vessels were maintained at pH 6 to ensure optimal decarboxylation activity.Figure 1 Catalytic activity of ADC in E. coli with increasing concentrations of L-aspartateAdapted from Monteiro, D., Patel, V., Bartlett, C.P., Nozaki, S., Grant, T.D., Gowdy, J.A., Thompson, G.S., Kalverda, A.P., Snell, E.H., Niki, H., Pearson, A.R., & Webb, M.E. (2015). The structure of the PanD/PanZ protein complex reveals negative feedback regulation of pantothenate biosynthesis by coenzyme A. Chemistry & Biology, 22(4), 492–503. Question 9Which of the following best describes the ADC activation mechanism?A.AcCoA binds to the PanD-PanZ complex to induce cleavage.B.PanD, PanZ, and AcCoA bind in a random order to form a ternary complex.C.A binary complex composed of PanD and AcCoA cleaves PanZ.D.PanZ binds AcCoA followed by PanD to form a ternary complex.
Question
Synthesis of coenzyme A (CoA) requires vitamin B5 as a substrate. In bacteria, vitamin B5 is synthesized by condensation of β-alanine and pantoic acid. β-alanine is produced by decarboxylation of L-aspartate, mediated by the enzyme aspartate α-decarboxylase (ADC). Active ADC is formed when its inactive precursor, PanD, binds to a regulatory complex composed of acetyl coenzyme A (AcCoA) and a protein known as PanZ. Formation of the PanD-PanZ-AcCoA complex causes the activation loop of PanD to fold into a β-pleated sheet, resulting in PanD autocleavage. Researchers hypothesize that this conformational change allows the Thr57 residue to cleave the N-terminal end of PanD to form ADC.The limited information on the role of PanZ in the synthesis of CoA has stimulated an investigation of its effect on ADC activity. Escherichia coli cells were provided with varying concentrations of PanZ, and the rate of β-alanine production was measured in three different conditions (Figure 1). Reaction vessels were maintained at pH 6 to ensure optimal decarboxylation activity.Figure 1 Catalytic activity of ADC in E. coli with increasing concentrations of L-aspartateAdapted from Monteiro, D., Patel, V., Bartlett, C.P., Nozaki, S., Grant, T.D., Gowdy, J.A., Thompson, G.S., Kalverda, A.P., Snell, E.H., Niki, H., Pearson, A.R., & Webb, M.E. (2015). The structure of the PanD/PanZ protein complex reveals negative feedback regulation of pantothenate biosynthesis by coenzyme A. Chemistry & Biology, 22(4), 492–503. Question 9Which of the following best describes the ADC activation mechanism?A.AcCoA binds to the PanD-PanZ complex to induce cleavage.B.PanD, PanZ, and AcCoA bind in a random order to form a ternary complex.C.A binary complex composed of PanD and AcCoA cleaves PanZ.D.PanZ binds AcCoA followed by PanD to form a ternary complex.
Solution
The ADC activation mechanism is best described by option D: PanZ binds AcCoA followed by PanD to form a ternary complex. This is supported by the information provided which states that active ADC is formed when its inactive precursor, PanD, binds to a regulatory complex composed of acetyl coenzyme A (AcCoA) and a protein known as PanZ. The formation of this complex results in a conformational change in PanD, allowing it to become active.
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